I want to try modifying the mom5
spack package to add a +repro
variant.
I’m following the instructions for developers v6 and I’ve built access-om2
fine.
Now I’m trying to use the version of spack-packages
I have modified.
I did this to add my modified package repo:
spack repo add ~/code/spack/spack-packages/
but when I try to install that variant it says it doesn’t exist:
spack install access-om2+repro ^netcdf-c@4.7.4 ^netcdf-fortran@4.5.2 ^parallelio@2.5.2 ^openmpi@4.0.2 %intel@19.0.5.281
==> Error: trying to set variant "repro" in package "access-om2", but the package has no such variant [happened during concretization of access-om2+repro ^netcdf-c@4.7.4 ^netcdf-fortran@4.5.2 ^openmpi@4.0.2%intel@19.0.5.281 ^parallelio@2.5.2]
The output of
spack config blame
output from spack config blame
--- packages: /g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:2 all:
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:3 providers:
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:5 mpi: [openmpi]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:20 awk: [gawk]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:21 blas: [openblas, amdblis]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:22 D: [ldc]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:23 daal: [intel-oneapi-daal]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:24 elf: [elfutils]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:25 fftw-api: [fftw, amdfftw]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:26 flame: [libflame, amdlibflame]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:27 fuse: [libfuse]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:28 gl: [glx, osmesa]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:29 glu: [mesa-glu, openglu]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:30 golang: [go, gcc]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:31 go-or-gccgo-bootstrap: [go-bootstrap, gcc]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:32 iconv: [libiconv]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:33 ipp: [intel-oneapi-ipp]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:34 java: [openjdk, jdk, ibm-java]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:35 jpeg: [libjpeg-turbo, libjpeg]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:36 lapack: [openblas, amdlibflame]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:37 libglx: [mesa+glx, mesa18+glx]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:38 libllvm: [llvm]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:39 libosmesa: [mesa+osmesa, mesa18+osmesa]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:40 lua-lang: [lua, lua-luajit-openresty, lua-luajit]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:41 luajit: [lua-luajit-openresty, lua-luajit]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:42 mariadb-client: [mariadb-c-client, mariadb]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:43 mkl: [intel-oneapi-mkl]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:44 mpe: [mpe2]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:46 mysql-client: [mysql, mariadb-c-client]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:47 opencl: [pocl]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:48 onedal: [intel-oneapi-dal]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:49 pbs: [openpbs, torque]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:50 pil: [py-pillow]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:51 pkgconfig: [pkgconf, pkg-config]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:52 rpc: [libtirpc]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:53 scalapack: [netlib-scalapack, amdscalapack]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:54 sycl: [hipsycl]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:55 szip: [libaec, libszip]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:56 tbb: [intel-tbb]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:57 unwind: [libunwind]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:58 uuid: [util-linux-uuid, libuuid]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:59 xxd: [xxd-standalone, vim]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:60 yacc: [bison, byacc]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:61 ziglang: [zig]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:18 compiler: [gcc, intel, pgi, clang, xl, nag, fj, aocc]
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:62 permissions:
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:63 read: world
/g/data/tm70/aph502/spack-build/spack/etc/spack/defaults/packages.yaml:64 write: user
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:6 perl:
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:7 externals:
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:8 - spec: perl@5.26.3~cpanm+shared+threads
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:9 prefix: /usr
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:10 buildable: False
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:11 cmake:
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:12 externals:
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:13 - spec: cmake@3.24.2
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:14 prefix: /apps/cmake/3.24.2
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:15 buildable: False
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:16 openmpi:
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:17 externals:
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:18 - spec: openmpi@4.0.2
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:19 prefix: /apps/openmpi/4.0.2
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:20 modules:
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:21 - openmpi/4.0.2
/g/data/tm70/aph502/spack-build/spack/etc/spack/packages.yaml:22 buildable: False
Doesn’t show the package repo I added, but when I try and add it again it seems to think it knows about it. Listing the repos shows it:
$ spack repo list
==> 3 package repositories.
access.nri /home/502/aph502/code/spack/spack-packages
access.nri /g/data/tm70/aph502/spack-build/spack-packages
builtin /g/data/tm70/aph502/spack-build/spack/var/spack/repos/builtin
I tried removing both the repos and then adding back my modified one:
$ spack repo list
==> 2 package repositories.
access.nri /home/502/aph502/code/spack/spack-packages
builtin /g/data/tm70/aph502/spack-build/spack/var/spack/repos/builtin
but it still won’t build. It doesn’t seem to want to find my updated SPD.
Any suggestions @harshula?