Regional MOM6 support group

There are a few people developing their own regional MOM6 configurations and we (@mmr0 and I) thought it would be nice for us all to keep in regular contact for mutual support and advice (see below for details). If you are interested in joining us, can you please reply to this post (or message me) and fill out the poll to indicate availability.

Regional MOM(6)’s support group.

Why: Is your small model cranky? Throwing tantrums? Waking (crashing) often? Need constant minding? Are your friends sick of hearing about your model’s inputs and outputs?

What: A support group for asking questions, sharing information, and supporting one another!

When: Once a month for an hour at a day and time yet to be chosen. Vote here for your availability. Poll closes Wed 1st October

Format: Casual. There will be space to bring your own questions, issues and updates

Who: Anyone who is running regional MOM6 configurations. Anyone who is about to start running regional MOM6 configurations. Anyone who wishes they were running a regional MOM6 configuration but can’t because of cryptic error message.

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Thanks to everyone who filled out the poll or expressed interest in joining a regional mom6 support group.

Mondays between 11:30 to 12:30 seems to work well and our first meeting is scheduled for Monday 27thOctober at 11:30 am AEST. Join via zoom:

https://anu.zoom.us/j/87993003089?pwd=Uu1WfKjg0CMxZAOVbJO0jggvJq6sS9.1

Anyone interested in regional MOM6 is welcome to attend.

Meetings will then be the once every 4 weeks with a break over Dec/Jan.

For the first meeting, please come prepared to give a short (1-3 mins, slides optional) introduction on what you are working on, or are planning to work on. Don’t feel you need to spend too long preparing for this –off the cuff will work.

The current agenda is:

  • The support group aims (Madi and Helen)

  • Introduction to everyone’s project (everyone)

  • Regional MOM6 support structure and future plans (Madi and Helen)

  • ACCESS-NRI update (Helen)

  • Any issues/successes to share?

You are welcome to add agenda items – or to bring along a regional MOM6 related issue, question or success. Post here or email me if you want to add something

Hope to see you all then

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Regional MOM6 support group minutes 27 Oct

Aims (@helen)

  • Database of common issues and solutions

  • Structure to seek support, discuss experimental design, bugs etc

  • Awareness of experiments in progress & completed to enable collaboration

Roundtable - who are we / what are we working on (All)

  • @mmr0 - Southern Ocean / Tasman sea domains with a focus on resolution (10, 3, and 1km) & how it impacts the representation of surface ocean processes & air-sea fluxes.

  • @claireyung - Pan-Antarctic regional with ice shelves. Current focus on validation & tuning.

  • @john_reilly - Has run interannually-forced South Pacific and EAC domain at 10km and 3km. Model evaluation and some parameter sensitivity here https://egusphere.copernicus.org/preprints/2025/egusphere-2025-4226/egusphere-2025-4226.pdf.

  • @Lizzie - Australian North West Shelf (NWS) domain encompassing parts of Indonesia, and including WOMBAT to look at the effect of tides on biogeochemistry

  • @janjaap.meijer - [planned] Meander region south of Aus/NZ. Regional model needed to resolve submesoscales & output high-frequency diagnostics not available in existing products

  • @cbull - Current ACCESS-NRI Ocean team lead, but also long-time regional modeller enthusiast using NEMO

  • @dougiesquire - ACCESS-NRI Ocean team, has been helping develop pan-An and NWS domains

Discussion points

Although we didn’t have too much time, several discussion points emerged from the roundtable.

  • Budgets and conservation - Claire is interested in heat/freshwater/volume budgets, mainly as a bug-finding tool. How to calculate for regional models? What extra diagnostics might be needed at the boundary (or for a sub-region?)?

  • Spin-up/equilibration times - Some discussion around what this means for regional models, which diagnostics to look at (e.g., KE and EKE), how this is affected by the change in resolution from forcing dataset → regional model, and how this is affected by flow conditions (e.g., coherent jet → chaotic eddy field) [madi - suggest this could be a good topic for a future meeting?]

  • Optimization and load balancing - some draft notes & instructions from ACCESS NRI here: Config - ACCESS-OM3-configs and here: Optimisation - ACCESS-OM3-configs

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Just a reminder that our next regional MOM6 support group is on this coming Monday 24th at 11:30 am. The zoom link is here:

Agenda is:

  1. Welcome and introduction to anyone new this week
  2. Around the room updates on what everyone is working on including successes and issues
  3. ACCESS-NRI updates
  4. When do we want to start up again next year?

All are welcome - see you there

Regional MOM6 support group minutes 24th November 2025

Attendees: @Lizzie, @janjaap.meijer, @helen, @cbull, @dougiesquire

Troubleshooting advice

Attendees shared some advice they had learned over the last month

  • Asking for too many CPUs (ncpus) can make the model run slowly. If the model is running slow then a simple optimisation test is to run the same short experiment on differing number of CPUs and compare the time taken.
  • If dye/passive tracers appear to leave out one boundary and then reappear in another then you need to explicitly set (in MOM_input) REENTRANT_X = False.

Auto tiling versus manual tiling

Auto tiling (where MOM6 automatically works out the layout of the model domain onto the requested CPUs) is easy to setup but some speedup can be gained if one manually optimises the tiling. Is it worth it? Suggestions were that it is not worth it in simple domains where there is only a single large land mass and only a few experiments being run off the domain.

Collaborations

@Lizzie knows of others who are running regional mom6 but may not have received invites to the meeting so will forward the invites

Discussions suggest that there are a few different groups who may be interested in developing a Southern Ocean domain. @janjaap.meijer to get in touch with them to see if they can coordinate efforts.

We need to have better visibility on who is working in the regional space to build collaborations, and it was suggested that it would be useful to compile a public list where we can share plans on models developed, under development or planned. Working groups such as COSIMA already have a concept for sharing plans – but this doesn’t have good visibility outside of COSIMA. @helen to start this conversation with the wider communities early next year.

ACCESS-NRI is developing a pathway whereby they can support the ongoing managements of a domain created by a researcher if there is enough community interest.

Sentonix

There is some community interest in getting models running on the Pawsey infrastructure. ACCESS-NRI is investigating and has gotten part of the way towards running an ACCESS-OM3 configuration on Sentonix. One issue is that files are deleted after 30 days so scripts are needed to move files on and off of scratch. Anyone interested in this problem is welcome to get involved, get in touch with @helen or @cbull.

Next meeting

Early Feb in 2026 works for everyone – date to be confirmed early next year.

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