Atmosphere WG meeting 24/07/2024 minutes
1. Processing AUS2200 output using ACCESS-MOPPeR (Paola)
Version stable from next week
Documentation at access-mopper.readthedocs.io/en/class/gettingstarted.html
Require two steps:
-
Creating mapping file (csv file with names of CMIP style variables, matched to name of variable in UM output.
-
Run the post-processing
.yaml file - enter details about the model simulations, job submission details and global attribute details
Why do we need to post-process?
- to get meaningful variable names
- to put everything on the same grid
- to prepare data to publish
- to reduce the amount of files you’re keeping
- to get pressure levels
- to define new derived variables etc.
What does CMORise mean?
- Tool used to post-process CMIP data, forcing data to their standard, with precise axis definitions etc.
- What you need to do for things like CMIP6, CORDEX etc.
Will the .yaml files be the same for every model run?
- Variable list might be mostly the same if you’re using the same model - may be able to use the same mapping if the experiments are basically the same setup.
- Only takes 10 seconds to run on Gadi.
- More complex process is adding extra mappings etc.
Does it also handle the raw UM output (pp files)?
- No
- You can add a step to include most of what the archiver does to output netcdf from the experiments.
- It would be useful if Dale’s code from AUS2200 that does this be ported to different UM regional versions. Code to do this is in suiteID: U-cs142. Note creation step and verification step. Using UM2NetCDF4.
Does it work on the ocean?
Does it handle odd dimensions (eg. AOD has 7 levels)?
- Possibly. Send Paola more details.
All the tables / mappings are on the website
https://github.com/ACCESS-Community-Hub/ACCESS-MOPPeR/tree/main/src/data
Most recent documentation
https://access-mopper.readthedocs.io/en/class/gettingstarted.html
2. Do we want an atmospheric model catalogue? (Navid)
Info from Navid about COSIMA cookbook
- develop configs
- analysis, science (main)
- perturbation runs
- run global ocean models
“My coding efforts have lasting impacts and help others move forward!”
→ Share code, notebooks, etc
→ Cookbook is collection of curated and well documented notebooks
“Let the intake catalogue and model simulations unite us!”
Everything is on a git-hub, including documentation and examples. Cosima-recipes.
How would this look for the atmospheric model?
Sample intake catalogue for AUS2200
How are students / people new to coding encouraged to feel confident to contribute?
- focus on friendly community
- encouraged to make small contributions at first - eg post a question
- at the latest hackathon, tutorials at different levels from beginners to advanced users were held, including how to make pull requests etc. Students gradually become familiar with it, discussing things publicly
Intake catalogue - added builder class to make it easier to add more things int.
ACCESS-NRI has someone new starting to work on intake catalogue. If you have model output that you would like to catalog with intake, please get in touch.
3. WG compute resources user report (Sonya)
Doing big evaluation of ACCESS-AM2 model. CCNs are not well representing in models - impacts radiation and precipitation in southern ocean. Data from 7 voyages in Southern Ocean.
Taken all CCNs and compared with ACCESS model running with aerosol model. ACCESS-CM2 but without ocean (prescribed SSTs).
Eight experiments. Experiments re-run with ACCESS-NRI compute due to problem with DMS climatology in anciliary files in initial runs.
Results: CCN captured well at Kenanook/Cape Grim, but poor elsewhere.
To be presented at ACCESS-NRI workshop in more detail.
4. BoM R&D workshop (Charmaine)
Registrations nearly at capacity, can still register for online attendance
5. ACCESS-NRI workshop (Heidi)
Abstract submission closes this weekend. Please submit your abstract! Next meeting of this group will be at the workshop.